Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEATAKFDFMASGEDELSFRTGDILKILS-NQEEWLKAEL--GSQEGYVPKNFID----IEFPEWFHEGLSRHQAENLLMG--KDIGFFIIRASQSSPGDFSISVRH-----EDDVQHFKVMRDTKGNYFLW-TEKFPSLNKLVDYYRTTSISKQKQVFLRDGTQDQGHRGNSLDRRSQGGPHPSGTVGEEIRPSVNRKLSDHLPLGPQQFHPHQQPSPQFTPGPQPPQQQRYLQHFHQDRRGGSLDINDGHCGLGSEVNATLMHRRHTDPVQLQAAGRVRWARALYDFEALEEDELGFRSGEVVEVLDSSNPSWWTGRLHNKLGLFPANYVAPMMR
1FMK Chain:A ((85-249))-TFVALYDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQAEEWYFGKITRRESERLLLNAENPRGTFLVRESETTKGAYCLSVSDFDNAKGLNVKHYKIRKLDSGGFYITSRTQFNSLQQLVAYYSKHAD-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1FMK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 510 2319 4.55 17.05
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 4.55
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_1FMK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FMK-query.scw
PDB file : Tito_Scwrl_1FMK.pdb: