Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEADALSPVGLGLLLLPFLVTLLAALCVRCRELPVSYDSTSTESLYPRSILIKPPQITVPRTPAVSYPLVTSFPPLRQPDLLPIPRSPQPLGGSHRMPSSQQNSDDANSVASYENQEPACKNVDADEDEDDYPNGYLVVLPDSSPAAVPVVSSAPVPSNPDLGDSAFSVESCEDYVNVPESEESAEASLDGSREYVNVSPEQQPVTRAELASVNSQEVEDEGEEEGVDGEEAPDYENLQELN
2K88 Chain:A ((1-60))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVSQKNGIATLLQAEKEAHEIVSKARKYRQDKLKQAKTDAAKEIDSYKIQKDKELKEFEC-----


General information:
TITO was launched using:
RESULT:

Template: 2K88.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 18 2760 153.33 46.00
target 2D structure prediction score : 0.23
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : 153.33
2D Compatibility (Sec. Struct. Predict.) : 0.23
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.362

(partial model without unconserved sides chains):
PDB file : Tito_2K88.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2K88-query.scw
PDB file : Tito_Scwrl_2K88.pdb: