Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIYSDMFDFAVDLRPNPDYSLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSMGDLACIAAEDLVLYQSFDRQKVAAWLEEENLATVLERDWGFSISQVKPTLECDFLVGWTKEVAVSSHMVQQIKQNINQNFLTSSKETVVSLVEALEQGKSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQDLQAVAKSSGAGGGDCGIALSFDAQSTKTLKNRWADLGIELLYQERIGHDDKS
4UT4 Chain:B ((115-159))------------------------------------------------------------------------------------------------------GLGSSSTLVVVMIKAFVELLNLPLDDYAIAQL--AYRIERVDCGLAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4UT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 84 -21099 -251.17 -468.86
target 2D structure prediction score : 0.84
Monomeric hydrophicity matching model chain B : 0.54

3D Compatibility (PKB) : -251.17
2D Compatibility (Sec. Struct. Predict.) : 0.84
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_4UT4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4UT4-query.scw
PDB file : Tito_Scwrl_4UT4.pdb: