Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKEMLEAFRILEEDKRIKKEDIIDAVVESLRSAYRRRYGQSDSVAIDFNEKTGDF-TVYTVREVVDEAFDSRLEISLKDALAINSAYELGDKIKFEEAPAEFGRVAAQSAKQTI-MEKMRKQTRAITYNTYKEHEQEIMSGTVERFDNRFIYVNLGSIEAQLSKQDQ-IPGEVFASHDRIEVYVYKVED-NPRGVNVFVSRSHPEMIKRLMEQEIPEVYDGTVEIMSVAREAGDRTKVAVRSHNPNVDAIGTIVGRGGANIKKITSKFHPARYDAKNDRMVPIEENIDVIEWVADPAEFIYNAI-APAEVDQVIFDE-SDSKRALVVVPDNKLSLAIGRRGQNVRLAAHLTGYRIDI-KSASEFEAMEDAASVELEVENDTVEE-------------------------------------------------------------------
4MTN Chain:A ((5-406))-GNEVLRIVDSIHRDKSIDKEIVFEGVEQAILSAARKHFGEEEVIEVHIDRTSGQPMVKTNGRE-----------------------------IDRDELGDILGRISAQTKQ--VMIQKIREAERDTLFDEYAQLRGQIVSGTVTRNEGSAITVNIGKAEAILPR-SEMIPGESHRPNERIRAVVLEVKKMGPR-VRVVLSRAHPDFVRRLLELEIPEVNERIIEIRSLAREAGYRTKVAVSCADSNIDPVGACVGVRGARIRNVGEELG--------------GERIEVVRWNDSLQVLVPNA-MQPSEVEDVILCPMLG--RVLVLVRDDQLSLAIGKRGQNVRLASKLVGWDIDVMTREELDQQLDQAVVAYSQIPGVSEELAEGLVSQGFLSFEDLSVIEPDELMEMGSLTQEQADVIVEYAERESERIEKEQDLRRATEKAERQSQE


General information:
TITO was launched using:
RESULT:

Template: 4MTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1438 42190 29.34 129.02
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 29.34
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_4MTN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MTN-query.scw
PDB file : Tito_Scwrl_4MTN.pdb: