Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKRVLITGVSSGIGLAQARLFLEKGYQVYGVDQGE---KPLLEGD--FRFLQRDLTLD------LEPIFDWCPQVDVLCNTAGVLDDYKPLLEQTAQDIQEIFEINYIIPVELTRYYLTQMLENKKGIIINMCSIASSLAGGGGHAYTSSKHALAGFTKQLALDYAEAGIQVFGIAPGAVKTAMTAADFEPGGLADWVASETPIKRWIEPEEIAELSLFLASGKASAMQGQILTIDGGWSLK
4NBU Chain:C ((14-247))--KVAIITGAANGIGLEAARVFMKEGAKVVIADFNEAAGKEAVEANPGVVFIRVDVSDRESVHRLVENVAERFGKIDILINNAGITRD-SMLSKMTVDQFQQVINVNLTGVFHCTQAVLPYMAEQGKGKIINTSSVTGTYGNVGQTNYAAAKAGVIGMTKTWAKELARKGINVNAVAPGFTETAMVAE--VPEKVIEKMKAQVPMGRLGKPEDIANAYLFLASHESDYVNGHVLHVDGG----


General information:
TITO was launched using:
RESULT:

Template: 4NBU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1213 -29978 -24.71 -134.43
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -24.71
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_4NBU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NBU-query.scw
PDB file : Tito_Scwrl_4NBU.pdb: