Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIFATSQVNPLTNSSVRNLRPKQRRLFMFWNLVHYEFKN--VNKWYLALYA--AVLVLSAL----IGIQT---------QGFKNLPYQESQATMLLFL-----ATVFGGLMLTLAISTIF---LIIKRFKGSVYDRQGYLTLTLPVSEHHIITAKLIGAFIWSLIST--AVLALSAVIILALTAPEWIPLSYVITFVETHLPQIFLTGISFLLNTISGILCIYLAISIGQLFNEYRTALAVAVYIGIQIVIGFIELFFNLSSNFYVNSLVGLNDHFYMGAGIAIVEELIFIAIFYLGTYYILRNKVNLL
2OH5 Chain:A ((2-248))--------ADVAGTSNRDFRGREQRLFNSEQYNYNNSLNGEVSVWVYAYYSDGSVLVINKNSQYKVGISETFKALKEYRKGQHNDSYDEYEVNQSIYYPNGGDARKFHSNAKPRAIQIIFSPSVNVRTIKMAKGNAVSVPDEYLQRSHPWEATGIK-----YRKIKRDGEIVGYSHYFELPH---EYNSISLAVSGVHKNPS-------SYNVGSAHNVMDVFQSCDLALRFCNRYWA-----------ELELVNHYISPNAYPYLD----INNHSY---GVA------------------LSNRQ---


General information:
TITO was launched using:
RESULT:

Template: 2OH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 922 -49576 -53.77 -225.34
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -53.77
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.078

(partial model without unconserved sides chains):
PDB file : Tito_2OH5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OH5-query.scw
PDB file : Tito_Scwrl_2OH5.pdb: