Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMWYNCKRFNPIIYKERKIFMRDLLSKKSHRQLELLELLFEHKRWFHRSELAELLNCTERAVKDDLSHVKSAFPDLIFHSSTNGIRIINTDDSDIEMVYHHFFKHSTHFSILEFIFFNEGCQAESICKEFYISSSSLYRIISQINKVIKRQFQFEVSLTPVQIIGNERDIRYFFAQYFSEKYYFLEWPFENFSSEPLSQLLELVYKETSFPMNLSTHRMLKLLLVTNLYRIKFGHFMEVDKDSFNDQSLDFLMQAEGIEGVAQSFESEYNISLDEEVVCQLFVSYFQKMFFIDESLFMKCVKKDSYVEKSYHLLSDFIDQISVKYQIEIENKDNLIWHLHNTAHLYRQELFTEFILFDQKGNTIRNFQNIFPKFVSDVKKELSHYLETLEVCSSSMMVNHLSYTFITHTKHLVINLLQNQPKLKVL-VMSNFDQYHAKFVAETLSYYCSNN-FELEVWTEL--ELSKESLEDSPYDIIISNFIIPP----------IENKRLIYSN--NINT-VSLIYLLNAMMFIRLDE
3NBM Chain:A ((5-106))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KELKVLVLCAGSG--TSAQLANAINEGANLTEVRVIANSGAYGAHY---DIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKSPSKALQFVLEH---


General information:
TITO was launched using:
RESULT:

Template: 3NBM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 335 -8199 -24.47 -96.45
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : -24.47
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.478

(partial model without unconserved sides chains):
PDB file : Tito_3NBM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NBM-query.scw
PDB file : Tito_Scwrl_3NBM.pdb: