Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLISWNIDSLNAALTSDSARAKLSQEVLQTLVAENADIIAIQETKLSA-KGPTKKHVEILEELFPGYENTWRSSQEPARKGYAGTMFLYKKELTPTISFPEIGAPSTMDLEGRIITLEFDAFFVTQVYTPNAGDGLKRLEERQVWDAKYAEYLAELDKEKPVLATGDYNVAHNEIDLANPASNRRSPGFTDEERAGFTNLL-ATGFTDTFRHVHGDVPERYTWWAQRSKTSKINNTGWRIDYWLTSNRIADKVTKSDMIDSGARQDHTPIVLEIDL
1DEW Chain:B ((23-279))LKICSWNVDGL---------RAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAE-----LQEL-PGLSHQYWSAPS-DKEGYSGVGLL-SRQCPLKVSY-GIGD-EEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTPYAYTFWTYM-MNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL


General information:
TITO was launched using:
RESULT:

Template: 1DEW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1459 -21089 -14.45 -82.70
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -14.45
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_1DEW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DEW-query.scw
PDB file : Tito_Scwrl_1DEW.pdb: