Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVVKVEKLSKKIKDKEILRNISFEINDGECVALIGPNGAGKTTLLDCLLGDKLVTSGQVSIQGLPVTSSKLDYTRAYLPQENIIVQKLKVKEL-IAFFQRIYPNP----LSNQEID----QLLQFVKQQKEQLAEK----LSGGQKRLFSFILTLIGRPKIVFLDEPTASMDTSTRQRFWEIVQEL--KAQGVTILYSSHYIEEVEHTADRILLLNKG--ELIRDTTPLAMRSEEIEKHFILPIAYKEVVEQSNLVENWTLKQDSLQVVTREADAFWELLAQAGCRMQEIEVNNRSLLNTIFEETQKGDN
4MKI Chain:B ((27-244))------------------LKDINFSIDDEEFVGIIGHTGSGKSTLIQQLNGLLKPSKGKIYINGIDITDKKVSL-KDIRKQVGLVFQYPEYQLFEETVFKDIAFGPSNLGLSEEEVKERVYEAMEIVGISKE-LADKSPFELSGGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKYKMITILV-SHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERLEK------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4MKI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 931 -13144 -14.12 -65.39
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.73

3D Compatibility (PKB) : -14.12
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.555

(partial model without unconserved sides chains):
PDB file : Tito_4MKI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MKI-query.scw
PDB file : Tito_Scwrl_4MKI.pdb: