Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCNVQLKNRLKELRARDGLNQTDLAKLAGVSRQTISLLERDEYTPSIIIALKISQIFNETVESVFRLEEDE
2XJ3 Chain:B ((4-65))-------NNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIFQWQP--


General information:
TITO was launched using:
RESULT:

Template: 2XJ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 196 -23358 -119.17 -376.73
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -119.17
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.866

(partial model without unconserved sides chains):
PDB file : Tito_2XJ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XJ3-query.scw
PDB file : Tito_Scwrl_2XJ3.pdb: