Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFLPVILSLALITNASYANPFDPKPASGQVEIPNIGSGIGLLDQQKEKFIGEKVFREVHKQMPVIQDVWLEDQFFQVFSNILSETQLGQPIALVVIKD----PQINAFAVP----GGLFALNTGLISSARNIDEIAGVMAHEIAHVSQRHFSRSEEAFKGQTLLSLAGLLAGVALA-----AQAGG----------D------AG--AAV-----MLGT-QAALLDKQLTYSRNQEREADRIGMQYMYAAGYNPQSMADYFETMHRATSR----VSFLPDFWLTHPLTSERMSEARLRANQMPKVKSRIYDVDFEILKWYTMVVAGEATENQLQSLASQKNLAGLLALSAFYLKQGDYTQAQATLEQAKSSGKPLVALIQTDIYLGQNKINQAYNSIAPLQMTMPENKAFSYKLAEVLLRQGKYAQVQTLVQRFINKNARDIQGWQLLQQAANLDKNSPLRAVNVLRYRAEAQYWSGSEEDAIKSMLHAQRLAKGNQAMSARIDSRLKQMQDERRMKI
4IL3 Chain:B ((230-446))------------------------------------------------------------------------GELKKSIESLADRVGFPLD-KIFVIDGSKRSSHSNAYFTGLPFTSKRIVLFDTLVNSN-STDEITAVLAHEIGHWQKNHIVNMVIFSQLHTFLIF-SLF-TSIYRNSSFYNTFGFFVEKSSSGFVDPVITKEFPIIIGFMLFNDLLTPLECAMQFIMSLISRTHEYQADAYAKKL----GY-KQNLCRALIDLQIKNLSTMNVDPLYSSYHYSHPTLAERLTALDY-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4IL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 537 -23058 -42.94 -131.01
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -42.94
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.259

(partial model without unconserved sides chains):
PDB file : Tito_4IL3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IL3-query.scw
PDB file : Tito_Scwrl_4IL3.pdb: