Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MKNEINYLTMAMSLIALA-----MSFLTFQCNLLIVGMCY---GAALVLIIIYIILKINRKTRNKDSNKC--
2NAX Chain:A ((1-76))GGSEFSDRSNELEIRGKYVVVPETSQDMAFKCPICKETVTGVYDEESGEWVWKNTIEVNGKYFHSTCYHETSQNSS


General information:
TITO was launched using:
RESULT:

Template: 2NAX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 135 -10486 -77.67 -169.12
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -77.67
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.68
QMean score : -0.072

(partial model without unconserved sides chains):
PDB file : Tito_2NAX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NAX-query.scw
PDB file : Tito_Scwrl_2NAX.pdb: