Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSHFQDKHVIHVDEQNQVIKFTRRNEIVECDHGRIQISKEDNEILCMDCNTKLNPVLWIAKYLDQLNQVTQRNNRMLAEVREIQAKLEKKNKFMCKHCHEVNTIDFKKLPSQAAVVRGMAVIDQEFDGMKVEHSR 2JMV Chain:A ((1-94)) ----GSGPTYCWNEANNPGGPNRCSNNKQCDGARTCSSSG----FCQGTSRKPDP---------GPKGPTYCWD-------------EAKNPGGPNRCSNSKQCDGARTCSSSGFCQGTA-----------GHAA

General information: TITO was launched using: RESULT: Template: 2JMV.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 542 31433 57.99 334.39 target 2D structure prediction score : 0.44 Monomeric hydrophicity matching model chain A : 0.64 3D Compatibility (PKB) : 57.99 2D Compatibility (Sec. Struct. Predict.) : 0.44 1D Compatibility (Hydrophobicity) : 0.64 QMean score : 0.115

(partial model without unconserved sides chains): PDB file : Tito_2JMV.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2JMV-query.scw PDB file : Tito_Scwrl_2JMV.pdb: