Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------MQQLMIMVTEVGKLEHTCNLLAEVNKGGKVIKVFDYNGNELSMNMDGIVTFNRKRW--ELPVKVDLK-----------------------------------------------------------------------------------------------------
5H35 Chain:C ((1-195))MYMILELLNIIGIIAFTISGSLKGTNKGLDIFGVVTLGVITSYAGGIIADILLGIYPPQILKELNYLLLSVGISIFVFYFYKWLQTNPIKMIIAISDAVGLSTFATLGASLAYSYGLNPISVGLIAAIVGTGGGVIRDVLVNEIPMVLTKEIYATAALLSGFIYYFTTPYLHHDSLFVAFLGSFLLRILSIKYNF


General information:
TITO was launched using:
RESULT:

Template: 5H35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 138 -12054 -87.34 -185.44
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain C : 0.42

3D Compatibility (PKB) : -87.34
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.42
QMean score : 0.135

(partial model without unconserved sides chains):
PDB file : Tito_5H35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H35-query.scw
PDB file : Tito_Scwrl_5H35.pdb: