Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAYDDQNIFAKILRGELPAIKLYEDDQVLAFMDIMPQADGHALVIPKTPAVTLLDLPPEAAAYTIQIVQKIAKAMETALNLDGIVLMQLSGAAAGQTVPHVHFHLIPT-NVHQLGKHAAQLGDQDKIKALAEKIKAAL
3LB5 Chain:B ((25-161))-AYDNNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPRMEGIE----NNIITPTEILEENAKKIRAAL


General information:
TITO was launched using:
RESULT:

Template: 3LB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 586 -62181 -106.11 -471.06
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.85

3D Compatibility (PKB) : -106.11
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.782

(partial model without unconserved sides chains):
PDB file : Tito_3LB5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LB5-query.scw
PDB file : Tito_Scwrl_3LB5.pdb: