Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKTSVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSSLGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFLTPSEQYSFISSTLIREIARLKGDVTKFVPQAVVEAFERKHQQGW
5H16 Chain:D ((3-163))--KTRVIYPGTFDPITNGHVDLVTRASRMFDEVVVAIAIGHHKNPLFSLEERVALAQSSLGHLSNVEFVGFDGLLVNFFKEQKATAVLRGLRAVSDFEYEFQLANMNRQLDPHFEAVFLTPSEQYSFISSTLIREIARLKGDVTKFVPQAVVEAFERKHQQGW


General information:
TITO was launched using:
RESULT:

Template: 5H16.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 740 -106812 -144.34 -663.43
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain D : 0.99

3D Compatibility (PKB) : -144.34
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.99
QMean score : 0.624

(partial model without unconserved sides chains):
PDB file : Tito_5H16.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5H16-query.scw
PDB file : Tito_Scwrl_5H16.pdb: