Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIEKFSVEKVLSVHRWTPTLFSFTMTRPSHFKFTAGQFARIGLKVGDELIVRAYSVVSSPFDETLEFFSIVVPDGAFTSNLQHLKVGDELYLEKIPYGYLTLARYQQPLPHDLWLLATGTGLAPFLSMLQDFETWSNYQKINLVYSVRTAAELAYVDRIQEIAE-TFGEGHLGFKFIPIITR--DPSAPLHERLPVLIENGELEKVAGLELSPASSHVMLCGNPQMVDDTKEALKRCGLTMNR-RGEGNIAVENYW
5TR9 Chain:B ((16-265))----KFTEEKILWVKHHTPKLITFAISRPESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYADTLEYFAVLIQDGPMSALFAKMQQGDTILLDKNATGFLLPERF--PDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEH-------SFRFVPVTTRAANPSGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMEN--


General information:
TITO was launched using:
RESULT:

Template: 5TR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1261 -116397 -92.31 -489.06
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : -92.31
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_5TR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TR9-query.scw
PDB file : Tito_Scwrl_5TR9.pdb: