Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIEAGLVLFFVFVVLLVLGMPIAISIAFSSMMTLLLVIPFDVSAFSSAQKMVGSINSFSLIAIPFFVLSGIIMNNGGIAKKLVDFAMLFVGRVPGALAHTNVLGNALFGSISSSAIAASTAIGGVLIPQQVEEGYDRKFATAVNIASAPTGMVIPPSTAFIMYSLVAGGASISALFMGGYLVGALWALGIMLVAFIVAKKNKYPVVEKGQMAHAGKIIKEAIPSLLLIVIIIGGILTGIFTAVEASAIAVIYSLLIAMFYYKTVKLKDIPNMLFQSVAMSGTIMFLLATSSMMSFAMAFTGIPQAISSLIMGV-TDNKFIILLLVNLVLLLVGMFMDVAPAILIFTPIFLPIVTSVGVDPVH-----YGLFSIMNLCVG-SITPPVGTGLYVGASVGGVKAEAMLKPLLPFYGVILVVLFLITYFPQIVMWLPNMLS
5ULE Chain:C ((64-218))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIFETQAALNNFA------NSIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKQRSTYVFVLLGVAYSASIGGIATLVGTGPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAI---------------


General information:
TITO was launched using:
RESULT:

Template: 5ULE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 477 -81473 -170.80 -550.49
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain C : 0.47

3D Compatibility (PKB) : -170.80
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.47
QMean score : 0.203

(partial model without unconserved sides chains):
PDB file : Tito_5ULE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ULE-query.scw
PDB file : Tito_Scwrl_5ULE.pdb: