Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -MDKFVAFMEKHFIPVASKIGAQRHLVAIRDSFMVSM-PLMILGALAVMINNLPIPGFQELMNSIFGGESWKGFGAAAWNGTFAILSVLIAFLLAYHLANGYRKDGVSAGVISLGSFFALGGALGMSSNGLFIAIIVGIISTEIFVRLSGNEKLIIKMPDGVPPAVAKAFA-SLLPAMITISAFALVAAIFAAFGVDDIVGSFYTVVQEPFMGLANSYPSALLLAFITPFLWF-------------------FGLHGANMVDPLMQTINAPAIEANVNAIAAGHSAPFIVNKP---------FFDSFVNLGGTGATLGLLLAIYLVGRKNKPYMVVTNLSIAPG------VFNINEPTMFGLPIVLNPIMF-IPFILTPMVLVSVAYFATSTGLVPAATVMP--PWVTPPIIGGVLATKSIAGGVLAAVNLVLSILIYL----------PFVKVATIQERRK-----------EALDA 4YZF Chain:A ((381-887)) GLVRDIRRRYPYYLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQM-GVSELLISTAVQGILFALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLVVAFEGSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYLPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFIQDTYTQKLSVPDGFKVVIHPLGLRS-EFPIWMMFASALPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHANALTVMIQEVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVTSLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKSTPASLALPFVLILTVPLRRVLLPLIFRNVELQCLD-

General information: TITO was launched using: RESULT: Template: 4YZF.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2083 -340993 -163.70 -823.65 target 2D structure prediction score : 0.54 Monomeric hydrophicity matching model chain A : 0.68 3D Compatibility (PKB) : -163.70 2D Compatibility (Sec. Struct. Predict.) : 0.54 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.138

(partial model without unconserved sides chains): PDB file : Tito_4YZF.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4YZF-query.scw PDB file : Tito_Scwrl_4YZF.pdb: