Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTLIIISHPTIEES-LNQQFFKEASAGLPATWHHLESSYPDGKIDIETELQLLAQHDRIIFQFPFYWYSSPAHLKIWQDNVLE------RAAHVLKGKELGIVLTTGVAEKEYQAGGKEEYTISEFLRPYQRIANKFHMTYLPPFVLAQFMYLSQEKRWEKLIAYQQYLSLEGKPSLTQRIDWFIQRVQENQKMQEEESEKQAYIVEALTEAKEQIEDLTFTLQEMKGTSL
3L9W Chain:B ((240-382))---LIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNIDIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVFSHGWAYGHGGTALHGKHLLWAVTTGGGESHFEIGAHPGFDV--LSQPLQATAIYCGLNWLPPFAM------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3L9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 519 -17365 -33.46 -127.68
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.70

3D Compatibility (PKB) : -33.46
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.677

(partial model without unconserved sides chains):
PDB file : Tito_3L9W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3L9W-query.scw
PDB file : Tito_Scwrl_3L9W.pdb: