Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNEKKAVMITKKAGEDMLNNEQFEEKTISRKEIYSGKIIDVAVDEVRLPDGGTSKRELVFHPGGVGIIAFDEQDRLLLVKQFRKPLEKVILEIPAGKIDPGEGQNPEMTAARELEEETGYRAKSLSHLTSMYLSPGFANEVLHIYHAQGVEKVENPLAQDEDEVLELYHLTLEEAQQAMKDQLICDAKTIYAIQYWELLTKGK
5C7T Chain:B ((3-166))----------------------HLEEKTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIPLLPNGNVVMIHQYRHAVKKVFLEFPAGKRDHNE--ETLLTAKRELLEETGYEAKDWKFLTTIHPVIGYSNEHIDLYLARDLTHLEQRL--DQGQFIEVVEVKPADLMQLVLEGKVSDVKT--------------


General information:
TITO was launched using:
RESULT:

Template: 5C7T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 669 -36989 -55.29 -225.54
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -55.29
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_5C7T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5C7T-query.scw
PDB file : Tito_Scwrl_5C7T.pdb: