Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPKKRKLLDLLMLFLLLSGIGILAYPFVSDALNNYLDQQIISHYQQQAVKENEEVMAKIQENMTKKNQQLAKEGGNPGADPFT---KKKEPAKKDRTYFEKHTIGILTIPEINVHLPIFDETNTVLLEKGASLLEGTSYPTGGENTHAVISSHRGLPQAKLFTDLPKLTLGDSFYIEINGRTLAYQVDQIKTVEPTDTKDLRIEKGQDFVTLLTCTPYMVNSHRLLVRGHRVPYHAKEVQKEVQKVSENKRFFLYGLLAACILIFLLLIYLFRQSFKIRNRS
2WTS Chain:B ((42-200))-------------------------------------------------------------------------------GDPWSEEMKKKGRAEYARMLEIHERMGHVEIPVIDVDLPVYAGTAEEVLQQGAGHLEGTSLPIGGNSTHAVITADTGLPTAKMFTDLTKLKVGDKFYVHNIKEVMAYQVDQVKVIEPTNFDDLLIVPGHDYVTLLTCTPYMINTHRLLVRGHRIPYVA-E--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2WTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 863 462 0.54 2.96
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : 0.54
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_2WTS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WTS-query.scw
PDB file : Tito_Scwrl_2WTS.pdb: