Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MVAQAIRNIISPKSVIAQYQKIDFSNKGTIPIRH---LNIGFDGKE-----IDIEFYVNNQFATLFFATLSVFLTYGEDL-------VIETARHHREFIQDPILKQRVTSLIGQ-------------EAIHSKLHNEFNDAI----KELEYPVDLYRFLGENFFKY----VFLKFPQPLKLSLMAGIEHFTAVLAEYMMKHEKNFYYTDDAKSR--------ALWMWHMLE--------------------------------ESEHKDIAYDVYQ----------ILNGNYPLRATGFLMAFITILGLIPTATLLVPVLRKPKELLT----RKFWKDARRGVNLIFSPKDGVFGSTIGQIFDYLRPNFHPNDHDTTQYLEYYKNKLLNEGGAIAPYFVKEFT-PPVRAVS---------------------------------------------------------------
4EXK Chain:A ((4-478))AKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPAAAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYAAGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSAVNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVA-LKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQT-VDAALAAAQTNAAAN-TPSPDLTVMSID--KSVLSPGESATITTIVKDIDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNERIDISFKYAMSFTKEISIRGRLS


General information:
TITO was launched using:
RESULT:

Template: 4EXK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1650 60457 36.64 191.93
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 36.64
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.151

(partial model without unconserved sides chains):
PDB file : Tito_4EXK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4EXK-query.scw
PDB file : Tito_Scwrl_4EXK.pdb: