Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQLSKLLDHWFPHPFVSFLIIIFWLMLAHSLDASDLLMAVILGLVIPRLVRPFITRTPHIHWKPA--------IKLC----FVVLWDIIISNFRVAKLVLGPPKKLHPKWYRVPLETEHEQVNSLLAMIITTTPGTVSAGIDQERGDILVHSLSTENTESDVQDIKQRYEAPLIEIFDVKSKSEDNA
5TVZ Chain:A ((4-106))------------------------------------------------RVKPSASLKLHHDLKLCLGDHSSVPVALKGQGPFTLTYDIIETFSSKRKTFEIKEIKTNEYVIKTPVFTTGG--DYILSLVSIKDSTGCVVGLSQPDAKIQVRRD----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5TVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 395 -16762 -42.44 -184.20
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -42.44
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_5TVZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TVZ-query.scw
PDB file : Tito_Scwrl_5TVZ.pdb: