Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMECDVKPVRLAILGLGTVGGGALKLLQENAAEIKRRTGREIQITHVGTRRPRPDLELEGIKQSADLLDIVRQPDVDVVVEVMGGIHPAYEIIMEAIKHGKQVVTANKALLAKHGNELFKAAEDNAVQIAYEAAVAGGIPIIKVIREGLAANHIEWLAGIINGTGNFILTEMREKGRAFDDVLKEAQELGYAEADPTFDVEGIDAAHKLTILASCAFGIPLQFDKVYTEGISKITAQDVKYAEELGFRIKHLGIARRAEKGIELR--VHPTLIPDEQLIANVNGVKNAVLVQANAVGPTLYYGAGAGAGPTASAVVADVIDIVRDISYTEDGAGTIPQLAFEALTNMPILSREEMTTGYYIRLNAEDQTGVLADVTTILSRAGISIDAIMQQSRLKDLIPIVILTDPIVESKMDDALAQIQALPAIRGEIVRIRLESLDS
2EJW Chain:B ((4-280))-------LKIALLGGGTVGSAFYNLVLERAEELSA-FGVVPRFLGVLVRDPRKPRAIPQELLRAEPFDLL---EADLVVEAMGGVEAPLRLVLPALEAGIPLITANKALLAEAWESLRPFAEEGL--IYHEASVMAGTPALSFL-ETLRGSELLELHGILNGTTLYILQEM-EKGRTYAEALLEAQRLGYAEADPTLDVEGIDAAHKLTLLARLLVDPGFPFAEVEAQGIARLTPEVLQKAEARGERVRL--VASLFGEGGRWRAAVAPRRLPQDHPLARARG--NALWVRARPLG-----------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2EJW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1397 -184719 -132.23 -671.70
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -132.23
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_2EJW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2EJW-query.scw
PDB file : Tito_Scwrl_2EJW.pdb: