Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEGVGLPLWLLAELTYRCLLQCPYCSNPLDYAQHKNELTTQEWFDVFDQARQ----------MGAVQLGFSG-GEPLVRQD-LEQLVA-HAHQLG-----FYTNLVTSGMGLTEQRISHLKQ-AGLDHIQISFQASDPVLNDALAGSK--HAFEQKYEMCRLVKKY----DYPMVLNFVIHRH-NI--DQIDKIIELCLELNADTVELAICQFYGWAFLNRQGLLPTQEQLIRAERITNEYREKLKAQNHPCKLIFVVPDYYEERPKACMNGWGKIFFTVAPDGMALPCHAARQLPISFPNVREQSLSRIWYESTGFNRFRGDAWMPEGCRSCPDKDRDFGGCRCQAYMLTGDASNADPVCGKSPYHQFIEQARAESEIDSSLEKLVFRNSRNSKQFTVQQNIPVQNIVDD
3RFA Chain:A ((115-349))--------ATLCVSSQVGCALECKFCSTAQQGF--NRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALD---KLGDMIDV-ALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWNPFPGAPY----GRSSNSRIDRFSKV-------LMSYG--FTT--IVRKT---RGD------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3RFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1027 -32420 -31.57 -156.62
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -31.57
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_3RFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RFA-query.scw
PDB file : Tito_Scwrl_3RFA.pdb: