Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYEVKSLNEECGIFGVWGHPDAASVAYFGLHSLQHRGQEGAGIVSNDRGK-LKGHRDLGLLSEVFKDQRKLQQLTGEAAIGHVRYATAGNGSVDNIQPFLFKFHDQSIGLAHNGNLINARSLRKEL-EENGAIFHSNSDTEILMHLIRRSE---------ETDFLNKLKSALNE-VKGGFAYLLMT-ETAMIAALDPNGFRPLAIGQM----KNGAYVIASETCALEVIGARFIRDVQPGEIVIINDEGIQIDCFTKDTQLS-ICSMEYIYFARPDSNIAGINVHTARKNMGRNLAKE-----SPVKADMVVGVPNSSLSAASGYAEASGIPYEIGLVKNQYIARTFIQPTPELREQGVRMKLSAVRGVVEGKKVIMVDDSIVRGTTSRRIVHLLKEAGAKEVHVRIASPPLKYPCFYGIDIQTRKELIAANHTIDEIKECIGADSLGFLSEEGLIESIGLEKDAPYSGLCMAYFNGDYPTPLYDYEEKYQESLKEKVSFF
1ECC Chain:B ((1-478))-----------CGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVF-EARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVN-SPYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFA-SELDNFRHYPLEADNIFAAIAATNRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSARVNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAENPDIQQFEC-SVFNGVYVTK--DVDQGYLDFL-------


General information:
TITO was launched using:
RESULT:

Template: 1ECC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2979 25850 8.68 56.81
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : 8.68
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_1ECC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ECC-query.scw
PDB file : Tito_Scwrl_1ECC.pdb: