Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSTSEAEGSISGSGTLRGRACASGGAGKFDKAMKMYQKSMAIRRRLKSMASSTTRSLGDRDDDGFGGGALNEESAAAQTSLSPLRGPMLRSSTQITRVAPASSIASLASPQHSRVLPEMAFGVATASERTAMASQPAIALDAGSSVETRSSMAALMLYSHVPLPALNSFKRLSDPPDVERETAPSSSSPFSLAIPSRGRTKGGSGNRHKKVDASGGENDAVWRKRSPTCSAHLDFPYRFSAERQRTASRHNSGGTSEGFGVGIHKYAGQPSTSTVDSPLLSPMPSFHQMMGRSYDVPALNAIFRGFSNGVDRWQQDSRLLRSPPSPTHATMPAAPPTSVPSVSTSLQLSSSLVSKMSVPPPAAAVTRQIPTVSVSSSAETTAAADVHAMPAGNDAFSYLGPRLSAQAPSRKDRSNSYPADKARPEASGRSTVEGRDGVHASGSLPLVKTMASAPNLKPNEASVLPLGPPPLDESSAATTTTAQFYSTALLAKTFDGAQYLNDYILLNEIGSGSTGRVVLAFSTSMNKSVAIKIILKPKEKYRLQHRVSASPSTSVLGQHSSGGTFSGGRAATALATTTPEAMQNFKSSSSSARRRSKHRQTPSTPFTTAADKTRNLQREVEVMKDLNHPNIVRLYEVINDP----KANSLFLVLQYVDNGAVAQLDSTGHIRAPLHPWTVLPIAAQISDGLVYLHEQHIVHRDIKPENILVNRD-GHAFLADFGVAELMSAKAGQPTAATLTYQGTPLFMAPEIYAGVDDEDRDEDAEQAPGRCTRRRSSNDADESSNMTASPLCEERRDSRVIDPFALDVWALGVTFYTLLIGHVPFTSMLQI---SQTVEK-----------------------------GVNIPASLPEQWRTVLRRMMEPRQELRISSAELCHMLHAMLAEQEAAEVRAGGRSRKASLSTRSRSATLGNPRKASHQCCAEGRMARSASLAADAEEESMNLGSSSSSDESGTSGYSKGILGLSITSVGLNILRPTRIRKKQELSCRES
1J1B Chain:B ((54-343))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---------------------------------------------------------------------------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRG-----EPNVSYICSRYYRAPELIFGAT--------------------------------------------DYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA--HSFFDEL---------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1127 -47620 -42.25 -188.22
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -42.25
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_1J1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J1B-query.scw
PDB file : Tito_Scwrl_1J1B.pdb: