Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMRIRLLACSRVEYGRVGPLKQCFPLISPGLLAHTSSRDSVCASAEAHPVLSTTVVLLPSSLFSLCRCSVKASGEATVLNGEGGARVVSAVHQAHPHEPLVGLMTQPLPLSTILRHPLASKRCMMIFHQNGEETMELFELLSRYEAVGPIGQGSYGYVCSARDNDLVERFQAKPPEEYEDASLTLEEREEVYDTNTLVAIKKLRQLFENNQPRMWLCATREIQLMMAFQHDNVMSATDFFIPLGGVEMMTYDSILQLQHTFDGVYVVMKKMDYTLREVLDSTIVTAAELAPGYETWLRRLRLLMANCGEVNADVSSTPTPVRASRLNVKAEAQGEDQAAAAPHSSTEQSRSGGREDVEDEAGATVPSSLDYPVAAAAAAAAPTNDHDAPVAKTSTDGGFEGKGGGDDEGAPVCCPLTTVALHSLTRDYRKFILYQIFRGVGYLHLCPVIHRDLKPENIMLDR-SYGTRITDFGQGRDVGLNATTDYVQTVLDNCTQWYAAPETLTVAINSPMGFIDHDSFHGVDVWSIGCIAAEMLIGRPLFYTTSMGGKSQLLSIFRVLGEPSASAIESIAEYRDKETRELFMNSVKKLVKTAPPSNTITPTLAELLRSPYGDEDEDEVGLIIDCLRWDPRERITIQAALQNPFFTKDGYDPVIDPEDTAKRVPSVRPEDISEPVSGRAFLWNLFLERHPEVKELWNSLVAKHEEELKVKKAAADT
1J1B Chain:B ((54-343))--------------------------------------------------------------------------------------------------------------------------------------------VSYTDTKVIGNGSFGVVYQAKLCD----------------------------SGELVAIKKVLQDK--------RFKNRELQIMRKLDHCNIVRLRYFFYSSGE------------KKDEVYLNLVLDYVPETVYRVARHYSR---------------------------------------------------------------------------------------------------------------------------------------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP-----NVSYICSRYYRAPELIFGA---------TDYTSSIDVWSAGCVLAELLLGQPIFPGDS--GVDQLVEIIKVLGTPTREQIREMNPNYT----E-FK--FPQIK---------AHPWT---KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL--------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1J1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1415 -135836 -96.00 -470.02
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -96.00
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.300

(partial model without unconserved sides chains):
PDB file : Tito_1J1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J1B-query.scw
PDB file : Tito_Scwrl_1J1B.pdb: