Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQNPAAQAGDKVPNMSNARRGETSDDYARHKAAASRAFLENHYQSLLANTRNGVGRAVGPRQKEPSFSDFHLFKCIGRGAFGEVFVCKYKSDKTDTLYALKRLRKSDMITKKQVVHVRSEKDVLAEAAASNPWVVHLYRSFQDSLYLYMVMEYMPGGDMISWLCDK-GIFDVESTRFYIAELCAAVASVHDMGFVHRDIKPDNILFGESGHIKLSDFGLSKRFVEKRGNLLDYDDPSSSSNGAEASADEKSAYESRTDAPSGSPSGDGAGTGIAHGRVREMFQSIVGSPGYIAPEILLR-----KPYGVGCDWWSVGVIMYEMLYGIPPFFSQNPNSTCHKIKNWREHLVFPPQ-RHIPDDAVDFMKRLIC-EPEK--RMTYDEICHHDFLKPMDMNGLLKLQAPYVPALSNRLDTKYFPEIKEPSAPMQQSEEQKVREVDPRGVMFADFRFNYSGDQAGPASA
5OTF Chain:A ((73-408))-----------------------------------------------------------------LHREDFEIIKVIGRGAFGEVAVVKMKN--TERIYAMKILNKWEMLKRAETACFREERDVLVNG--DCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV---------------------------------------------------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDV--------EILPPGSHTGFSGLHLPFIGFTFTTE---------


General information:
TITO was launched using:
RESULT:

Template: 5OTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1619 -76184 -47.06 -239.57
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -47.06
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_5OTF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5OTF-query.scw
PDB file : Tito_Scwrl_5OTF.pdb: