Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMFNEAAVPFIQTARDNGLLFGGSNVPAMIDYTSEHRKSYHVRGSVFEVAPH-FEVLNGIGYGAYGVVCAAVDLRLVASSVYYNEAMRIIEEGGRIVTRQRRGHDAPVYFRTRAVLDEAGRGGPVRVPHLYSEPFKRRVLACGGVSPFVAIKKVTKVFDDLVDGRRILREIKLLRYLQGHPNIVRLMEVGRPHVPTGASSSAAFDDIYLVTDLMDTDLAALLKSSQEIEMDQFRFIAYQLMKVLVYVHSSGVIHRDLKPGNILLNGNCDMKLCDFGLSRGGVPAWPHESTLTAVATAAESSAKELEDWGLFCWSSSAVRGASSAPHAAKQPPLYSLTDYVVTRYYRAPELLIM-GRYNHAIDMWSAGCILAEMLLRRPLFTGANYLSQLALILETPGLRGVPQTPEQVAALFEGGEEGKHFINDILFRKTARGRDSLTLSNQVHSQVLFHSTLFGFNVDIPISLGILIAKLLSFDPRKRPTAVEALRDPFFRPLYDSRDEILRCPASDPSVEREEIDDIAAYQKAHPCVVVDESPVFTWEFDHRITSAQALRSLFEEECQISRDVQQQIERQQRPR
5CI6 Chain:B ((20-369))-----------------------------------RFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSE------------------------------------------------------------------TN---ESVAIKKIANAFDNKIDAKRTLREIKLLRHMD-HENIVAIRDIIPPPLR------NAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVT-----------------------------------------------------------VTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGT---PS----LEF---LNENAKRYIRQLPPYPR-------------Q--S-IT-DKFP---TVHPLAIDLIEKMLTFDPRRRITVLDALAHPYLNSLHDISDEPECTIP------------------------------FNFDFENHALSEEQMKELIYREALAFNPEYQ---------


General information:
TITO was launched using:
RESULT:

Template: 5CI6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1637 -43309 -26.46 -129.28
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -26.46
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_5CI6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CI6-query.scw
PDB file : Tito_Scwrl_5CI6.pdb: