Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQSITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHA--GQSKLAPVIQPLVLARFLLRINDDGLSYIEDYHEVMTFPKINS-DLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELMEAGL-DYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGTCLCPEHYHEDERRCHLNPNIPYLLNQFQAIDFETLETISLK-PGIKQELRQFMDQLYEEYV-GIHLKSKKFIDSLADWGQLLKEEKK
3Q8D Chain:A ((2-232))---EGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFTP----LLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLG-------------YGVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFM-----------


General information:
TITO was launched using:
RESULT:

Template: 3Q8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1038 -40708 -39.22 -180.92
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -39.22
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_3Q8D.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q8D-query.scw
PDB file : Tito_Scwrl_3Q8D.pdb: