Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKLYNKSELRYSRIFFDKRPPAFAFILIISTAIILSGALVGAAYIPKNYIVKANGNSVITGTEFLSAISSGKVVTLHKSEGDMVNAGDVIISLSSGQEGLQASSLNKQLVKLRAKEAIFQKFEQSLNEKYNRMSNSGEEQEYYGKVEYYLSQLNSENYNNGTQYSKIQDEYTKLNKITAERNQLDADLQTLQNELIQLQQQGDSPSLSDTTSADDKAKLETKILEITTKIEALKTNITSKNSEIDSQQSNIKDMNRTYNDPTSQAYNIYAQLVSELGTARSNNNKSITELEANLGVATGQDKAHSILAPNEGTLHYLVPLKQGMSIQQGQ--TIAEVSGKEKGYYVEAFVLASDISRVSKGAKVDVAITGVNSQKYGTLKGQVRQIDSGTISQETKEGNISLYKVMIELETLTLKHGSETVVLQKDMPVEVRIVYDKETYLDWILEMLSFKQ
2F1M Chain:D ((54-297))--------------------------------------------------TELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLT--------------------------------------------V-------------------------NRYQKLLGTQYIS---K------------------QEYDQAL-------------------------------------------ADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKS-NVTEGALVQNGQATALATVQQL-DPIYVDVTQS----------GKAKVSLITSDGI-KFPQDGTLEFSDVTVDQT------TGSITLRAIFPNP-------DHTMMPGMFVRARL-------------------


General information:
TITO was launched using:
RESULT:

Template: 2F1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 856 -23336 -27.26 -105.11
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain D : 0.61

3D Compatibility (PKB) : -27.26
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_2F1M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F1M-query.scw
PDB file : Tito_Scwrl_2F1M.pdb: