Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMKNLNNYREISNKELQEIKGGFGVGVGIALFMAGYTIGKDLRKKFGKSC-------------------------------------------------------------------------
5MG8 Chain:A ((63-344))DLDNIKRELSYYNDATKRKLDFMSSAPGWEDAYQTYQLLKEYESAFEAPAYGPIYMNLKCKEKGFAALIEGFFRTDTFRTFIMSNYNDYLKLMDLITSKTKYTPTIREFSSERKKKIEDFEPPCSREKLQSFGFDGYVIDFLEGPEVVLVALCHMLKIHQIPIAKRELPPASVNALNNFRLANGD------------PVLKTYLAGSSIHLVFRSAYGDREITRRTDPLPSRSIYFSENVEMDLVKRKEEQLNAQLSQLENLQNEERKLQEKVNEHESLLSRTNDILSTLRKER


General information:
TITO was launched using:
RESULT:

Template: 5MG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 26 2060 79.21 54.20
target 2D structure prediction score : 0.16
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : 79.21
2D Compatibility (Sec. Struct. Predict.) : 0.16
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.161

(partial model without unconserved sides chains):
PDB file : Tito_5MG8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MG8-query.scw
PDB file : Tito_Scwrl_5MG8.pdb: