Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEAVHTEKQWERSATELPPFIIKRLPVRLTFDNNYFNDRYQVIPIGGYNVIIENILKD--VEVGLGVDCFDYREELEASA--NKVAFTGMIDQYFDYKHGELEYRSLRFKHEVLDEENHQGNAVVNYTDREIPYTRIIEHKKFE----YGLQPKTVITHEYPADWKRGDEPYYPINDEKNNAIFSKYHEEA---SQNDKVIFCGRLADYKY
5EQD Chain:B ((158-363))-----YTAKQWQTDPKDLPASNITRLPVRYTFDNRYFNDTYEGLPVEGYTKWLENMAADERIEVRLDTDWFDVRDDLRAANPDAPVVYTGPLDRYFDYAEGRLGWRTLDFELEVLETGDFQGTPVMNYNDLDVPYTRIHEFRHFHPERTYPTD-KTVIMREYSRFADNDDEPYYPINTEADRAVLAAYRARAKAETASAKVLFGGRLGTYQY


General information:
TITO was launched using:
RESULT:

Template: 5EQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 553 16082 29.08 82.47
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.83

3D Compatibility (PKB) : 29.08
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_5EQD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EQD-query.scw
PDB file : Tito_Scwrl_5EQD.pdb: