Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
4DWJ Chain:F ((28-218))-----FITFEGPEGSGKTTVINEVYHRLV-KDYDVIMTREPGGVPTGEEIRKIVLEGN--DMDIRTEAMLFAASRREHLVLKVIPALKEGKVVLCDRYIDSSLAYQGYARGIGVEEVRALNEFAINGLYPDLTIYLNVSAEVGRERIIKNS-RDQNRLDQEDLKFHEKVIEGYQEIIH--SQRFKSVNADQPLENVVEDT------------


General information:
TITO was launched using:
RESULT:

Template: 4DWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 878 -64449 -73.40 -341.00
target 2D structure prediction score : 0.79
Monomeric hydrophicity matching model chain F : 0.83

3D Compatibility (PKB) : -73.40
2D Compatibility (Sec. Struct. Predict.) : 0.79
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.612

(partial model without unconserved sides chains):
PDB file : Tito_4DWJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DWJ-query.scw
PDB file : Tito_Scwrl_4DWJ.pdb: