Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELFMKITNYEIYKLKKSGLTNQQILKVLEYGENVDQELLLGDIADISGCRNPAVFMERYFQIDDAHLSKEFQKFPSFSILDDCYPWDLSEIYDAPVLLFYKGNLDLLKFPKVAVVGSRACSKQ--GAKSVEKVIQG-LENELVIVSGLAK-GIDTAAHMAALQNGGKTIAVIGTGLDVF-YPKANKRLQDYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAM------EEGRDVFAIPGS-ILDGLSDGCHHLIQEG---------AKLVTSGQDVLAEFEF
5ITS Chain:C ((10-186))-------------------------------------------------------------------------------------------------------------LQRVTVFTGSALGSSSLYTQAAQTLAKTAVDRGIDLVYGGGKVGLMGIVADAFLESGGEAFGVITESLMKGELGHE--K----L-TE-----------LEIVPDMHIRKRRMAELGDGFIAMPGG--AGTLEELFEVWTWQQLGIHQKPVALYDVDGFWQPLLEMLEQMTQRGFIKRDFFECLIVESDPHALLKAMQ-


General information:
TITO was launched using:
RESULT:

Template: 5ITS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 760 4935 6.49 31.63
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.62

3D Compatibility (PKB) : 6.49
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.452

(partial model without unconserved sides chains):
PDB file : Tito_5ITS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ITS-query.scw
PDB file : Tito_Scwrl_5ITS.pdb: