Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIFATSQVNPLTNSSVRNLRPKQRRLF-------MFWNLVHYE--FKNVNKWYLALYAAVLVLSALIGIQTQGFKNLPYQESQATMLLFLATVFGGLMLTLAISTIFLIIK------RFKGSVYDRQGYLT--------LTLPVSEHHIITAKLIGAFI----WSLISTAVL-----ALSAVIILAL---------------TAPEWIPLSYVITFVETHLPQIFLTGISFLLNTISGILCIYLAISIGQLFNE-----YRTALAVAVYIGIQIVIGFIELFF-----------NLSSNFYVNSLVGLNDHFYMGAGIAIVEELIFIAIFYLGTYYILRNK-VNLL
1D0V Chain:A ((4-349))LHALLRDIPAPDAEAMARTQQHIDGLLKPPGSLGRLETLAVQLAGMPGLNGTPQVGEKAVLVMCADHGVWDEGVAVSPKIVTAIQAANMTRGTTGVCVLAAQAGAKVHVIDVGIDAEPIPGVVNMRVARGCGNIAVGPAMSRLQAEALLLEVSRYACDLAQRGVTLFGVGELGMANTTPAAAMVSVFTGSDAKEVVGIGANLPPSRIDNKVDVVRRAIAINQPNPRDGIDVLSKVGGFDLVGMTGVMLGAARCGLPVLLDGFLSYSAALAACQIAPAVRPYLIPSHFSAEKGARIALAHLSMEPYLHMAMRLGEGSGAALAMPIVEAACAMFHNMGELAASNIVLP


General information:
TITO was launched using:
RESULT:

Template: 1D0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1620 -155378 -95.91 -550.98
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -95.91
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.317

(partial model without unconserved sides chains):
PDB file : Tito_1D0V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D0V-query.scw
PDB file : Tito_Scwrl_1D0V.pdb: