Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTSMRKKTIGEVLRLARINQGLSLDELQKKTEIQLDMLEAMEADDFDQLPSPFYTRSFLKKYAWAVELDDQIVLDAYDSGSMITYEEVDVDEDELTGRRRSSKKKKKKTSFLPLFYFILFALSILIFVTYYVWNYIQTQPEEPSLSNYSVVQSTSSTSSVPHSSSSSSSSIESAISVSGEGNHVEIAYKTSKETVKLQLAVSDVTSWVSVSESELEGGVTLSPKKKSAEATVATKSPVTITLGVVKGVDLTVDNQTVDLSKLTAQTGQITVTFTKN
5UK3 Chain:I ((22-82))----------NQFIKAKESKGLTYQQMAQLLSVNKVWLTSVLHGQNC--CDI----QLAHRICDTLGISHEYANELT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5UK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 204 -29154 -142.91 -477.93
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain I : 0.52

3D Compatibility (PKB) : -142.91
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_5UK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UK3-query.scw
PDB file : Tito_Scwrl_5UK3.pdb: