Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTANIMTTLKNQITDALKTSMRAKDMATVTVLRSLQAAIKQIEVDERIELDDAQVLAVIEKQIKQRKESIKAFEGAGRDDLASKEQAEAEVLSQFLPEAMTEEELDSLIEQTIAAQEATSMKDMGKVMNSLRPIIAGRADPAQVSAKIKAKLA--------- 3IP4 Chain:B ((1-482)) MHFETVIGLEVHVELKTDSKMFSPSPAHFGAEPNSNTNVIDLAYPGVLPVVNKRAVDWAMRAAMALNMEIATESKFDRKNYFYPDNPKAYQISQFDQPIGENGYIDIEVDGETKRIGITRLHMEEDAGKSTHKGEYSLVDLNRQGTPLIEIVSEPDIRSPKEAYAYLEKLRSIIQYTGVSDVKMEEGSLRCDANISLRPYGQEKFGTKAELKNLNSFNYVRKGLEYEEKRQEEELLNGGEIGQETRRFDESTGKTILMRVKEGSDDYRYFPEPDIVPLYIDDAWKERVRQTIPELPDERKAKYVNELGLPAYDAHVLTLTKEMSDFFESTIEHGADVKLTSNWLMGGVNEYLNKNQVELLDTKLTPENLAGMIKLIEDG------------TMSSKIAKKVFPELAAKGGNAKQIMEDNGLVQISDEATLLKFVNEALDNN-----------EQSVEDYKNGKGKAMGFLVGQIMKASKGQANPQLVNQLLKQELDKRLEHHHHH

General information: TITO was launched using: RESULT: Template: 3IP4.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 433 52703 121.72 405.41 target 2D structure prediction score : 0.72 Monomeric hydrophicity matching model chain B : 0.58 3D Compatibility (PKB) : 121.72 2D Compatibility (Sec. Struct. Predict.) : 0.72 1D Compatibility (Hydrophobicity) : 0.58 QMean score : 0.386

(partial model without unconserved sides chains): PDB file : Tito_3IP4.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3IP4-query.scw PDB file : Tito_Scwrl_3IP4.pdb: