Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLSQIDEMLIGDLDLQFVMPWEFEDLNPEAFREFNRELYAHRFDLDYESYSVDNDIDLHLSNYYSSCETNKLIPSNCFFKLVEYMLVVLESRSFTSLFSNCVEFYNTKYSNEYLTFFLNLFSTSKSEVARDNLRMYITEIFDDKRYWANNELFDDSLLFEENLQQLQIIRVM-
5ICA Chain:A ((1-163))--TKQTVETLMAGERIAEALELGMTDL--NTIREWEEARQIN----PNIAPPQRNPIFVALGNIPAETYVLNTLQKIKPASLHDALLV-LPFSTIPSLLTFLNLFAQRELNVPLTCRILFFVLKTHHKQIVAS--RTMRATLEKVRANLRAALRRQKDEMGFNIAALKVVSMQL


General information:
TITO was launched using:
RESULT:

Template: 5ICA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 498 -61728 -123.95 -381.03
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -123.95
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.177

(partial model without unconserved sides chains):
PDB file : Tito_5ICA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ICA-query.scw
PDB file : Tito_Scwrl_5ICA.pdb: