Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFVFNGFYTLISAVIVLLLGRFLVNRIDFLERYNIPEPVAGGLVAAVVSLLVHTFWGYSIVFSSELQTSFMLVFFASIGLSANFMKLKEGGTALVIFLICVASFIVVQNAVGMSLATLLGLDPLIGLIAGSITLTGGHGTAGAWGEILESQHGIQGALALGMASATFGLIMCVIGGPLAKLLINRYSLAQAKTNAEIQQRDTHVEQNSDDLAPFENPHQVRLITADNAITTLGMFAACLAFAEFMTGFSKGTWFELPTFVWALGGGVILRNIL-E--SVL--KV----------DIFDRAIDVFGNASLSLYLAMALLSLKLWQ----LADLAGPLVV--ILVAQTLTMALYAAFVTFRVMGKNYDAAVLAASHCGFGMGATPTAVANMQAITNMYGPSHKAFLIVPLCGAFFVDLINATVIQLMLKFIA
1ZCD Chain:A ((18-175))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LIIAAILAMIMANSGATSGWYHDFLETPVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLYLAFNY---A-DPITR----EGWAIP-AATDIAFALGVLALLGSR-VPLALKIFLMALAIIDDLGAIIIIALFY----


General information:
TITO was launched using:
RESULT:

Template: 1ZCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 218 -34439 -157.98 -251.38
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.49

3D Compatibility (PKB) : -157.98
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.106

(partial model without unconserved sides chains):
PDB file : Tito_1ZCD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ZCD-query.scw
PDB file : Tito_Scwrl_1ZCD.pdb: