Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKLCDVVVVSIFVNPTQFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPRLTNISV-SQITDDLCGSSRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAEDGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQGKDLQQVL-ADLKTLLTDNGFVVDYVEARQP-NLLAASQFDRDIVLFVAAKLGGTRLIDNLQVAFTPQ
1V8F Chain:B ((1-274))MRTVSTVAELRAAL-----PREGVGFVPTMGYLHRGHLALVERARRENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFAPGVEEMY-PEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNVYLSPETRKKAPVLYRALLAMREVAGQGGSVAEALRAGEEALRAVPEFRKDYLAIVHPETLLPLSDWVAGARGIVAGRFPEARLIDNLEV-----


General information:
TITO was launched using:
RESULT:

Template: 1V8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1419 -95725 -67.46 -353.23
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.84

3D Compatibility (PKB) : -67.46
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.545

(partial model without unconserved sides chains):
PDB file : Tito_1V8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V8F-query.scw
PDB file : Tito_Scwrl_1V8F.pdb: