Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMQTLRASKCGLSTAQLPSSILDVIDSLTKAGYEAYIVGGGVRDLMLGLNPKDFDAVTNATPSQIKEVFGRRCRIIGR---RFELAHVYSGRELIEVATFR--APPKKAVTSASGMILRDNNWGTIEQDFARRDFSINTLYYQPR---KGIVLDFCKAIDDVKSKTLRLLGDPVQRFEEDPVRMLRTLRFAAKLNFKIDPAILDIFDVEMTQLLRDVSPHRLYDESQKLFTMGHLARVLPMLIAFGVWKQLFADIRPDLTPFIQRAAKNTDQRIQVGKTINPAFFYAVLLWQPFLERCDFYLSKGVVPAEARAQAGLDVLKRQATRTVIPRFAETFIREVWEMQTRLLNPKPQQIEALASHARFRAGFDFLLLREKSGDDTTQGMGSWWEAYQEMSNDEKEAAISQYNRQKAKSRRKVAAEPVESNKVDTEIEPLVDVPEPRSRRGKKERARQEQSIDRFIEKSSAAQTNVMSDHPILKRKRVQRDLSQVIFGPTQ
4WC1 Chain:B ((10-187))------------------------------GLRAYIVGGVVRDILLGKEVWDVDFVVEGNAIELAKELARRHGVNVHPFPEFGTAHLKIGKLKLEFATARRE--------PAS-----------LKEDLIRRDFTINAMAISVNLEDYGTLIDYFGGLRDLKDKVIRVL-HPVS-FIEDPVRILRALRFAGRLNFKL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4WC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 606 -21542 -35.55 -156.10
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -35.55
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.399

(partial model without unconserved sides chains):
PDB file : Tito_4WC1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WC1-query.scw
PDB file : Tito_Scwrl_4WC1.pdb: