Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIYDGQVADNYMYQDSNQAAIVVSHSTPSLPYPFTMKPNNHSTETNTPPAIDVEKFVAKLESITSRRSKARCARSIRIALESAGADVENHPIAASDWGDTLKKIGYKEINPAFDEPQEGDIYIIHRTRNHIYGHIAGYTGSEWVSDFKQSSYDVYKDDNVTYTYYRLG
2K3A Chain:A ((51-114))------------------------------------------------------------------LYTAGQCTWYVYDKV---GGNIGSTWGNANNWASAASSAGYTVN----NSPEAGSILQSTA---GGYGHVAYVE-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 2K3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 219 -25437 -116.15 -397.45
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -116.15
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.311

(partial model without unconserved sides chains):
PDB file : Tito_2K3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2K3A-query.scw
PDB file : Tito_Scwrl_2K3A.pdb: