Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRDTVFLKVESRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDL-SDAQLAASIS----TMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQ----QSEVADGASEILYEILGLDTGRHTRTSVSVYQLPKNASVEINFIFALK
3D01 Chain:L ((10-164))--MSDVIEGRLKELGFTLPVA----ANYVPFTISGNLLYVSGQLPMESGKIAVTGLVGRDV-DVASAQRAAELCAVNILAQVKAALNGDLSKIR---RVIKLNGFVASVPEFVEQHLVIN----GASNLIATVLG-EPGRHARAAVGMASLPFNASVEIDAIVEID


General information:
TITO was launched using:
RESULT:

Template: 3D01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 676 -8418 -12.45 -59.28
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain L : 0.73

3D Compatibility (PKB) : -12.45
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_3D01.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3D01-query.scw
PDB file : Tito_Scwrl_3D01.pdb: