Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPAVPHSSLNPVLIQLEQVSVHRDQRDILKKVDFA-LHENEIVTLIGPNGAGKSTLIKVLLGILKPSSGRVISNKKLKMAYVPQKFNPSHSLPLRVQDLLDLEKC-----SPALRQEIIQDTGIAKLQQSKVQQLSGGERQRVLLARALLRKPDILVLDEPMQGLDIQSEAELYEYVRSLPERYGCAILIVSHDLQWVMQGTQRVVCLNKHICCSGLPESIQQHPEYQAIFGTHRVFYQHHHDHCAHGDAAHPCPHNNRPHIHPEPEA
4CRM Chain:P ((358-541))-------------------SLKKTQGDFVLNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIP--KLNVSMKPQKIAPK--FPGTVRQLF-FKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CRM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 784 -1531 -1.95 -8.60
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain P : 0.74

3D Compatibility (PKB) : -1.95
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.547

(partial model without unconserved sides chains):
PDB file : Tito_4CRM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CRM-query.scw
PDB file : Tito_Scwrl_4CRM.pdb: