Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFKNRFFNTMQIQNQVQLKPFNTLSLDVTASHYTKVKSIEDIEEAL----AFAKEHELNVLVLSGGSNMLLPQQINAL-VIHLDIQGIDVLSEDQDFIRVKVGAGQVWHDFVLYTTKQNWFGLQNLALIPGLVGASPVQNIGAYGVEVGEFIESVQVYDRLLKQTGSISAADCHFSYRHSIFKDEPARYIIT---HVTFKLLKQA-NLKLNYGDLKQAV----GDNLTAENLQNQVIHIRQSK--LPDPKEYP--NVGSFFKNPIVNTQEFERLIAQFST-----IPHYPQANGNVKIAAGWLIDQAGWKGKQLGVVG-----MFHKQALVLVNYANASLADVKKTYQAVQHDVEQRFQIMLEPEPVLYNNLGLIENHTE
5JZX Chain:D ((46-404))------FAGAHIAEAVPLAPLTTLRVGPIARRVITCTSAEQVVAALRHLDSAAKTGADRPLVFAGGSNLVIAENLTDLTVVRLANSGITI---DGNLVRAEAGA--VFDDVVVRAIEQGLGGLECLSGIPGSAGATPVQNVGAYGAEVSDTITRVRLLDRCTGEVRWVSARDLRFGYRTSVLK-------PTVVLEVEFALDPSGRSAPLRYGELIAALNATSGERADPQAVREAVLALRARKGMVLDPTDHDTWSVGSFFTNPVVTQDVYERLAGDAATRKDGPVPHYPAPDG-VKLAAGWLVERAGF-GKGYPDAGAAPCRLSTKHALALTNRGGATAEDVVTLARAVRDGVHDVFGITLKPEPVLIGCM--------


General information:
TITO was launched using:
RESULT:

Template: 5JZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1795 -26613 -14.83 -81.89
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain D : 0.78

3D Compatibility (PKB) : -14.83
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.435

(partial model without unconserved sides chains):
PDB file : Tito_5JZX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JZX-query.scw
PDB file : Tito_Scwrl_5JZX.pdb: