Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRPDSKSMNYQLLKTFSRQPIQFGRFLARLLAGLVNTLKITRTSKSIELNLRIALPYLTPQQRIAITEKAVRNELTSYFEFLSIWGSSNSKNISRIHRIEGEHFFHEALAAKKGVVLIVPHFGTWEVMNAWCAQFTSMTILYKPVKNADADRFVREARSREQANLVPTDESGVRQIFKALKQGETTVILPDHTPNVGGDMVNYFGVPLASSNLSAKLIQKTKAKALFLYAIRNENDGFTIHIEPMDEKIYEGTADDGTYVIHQAIEQLIYQYPEHYHWSYKRFKANPALDNIYNIDPTEALKIVDRLKAEALKTSTQPEPIQTSVM
5A0Y Chain:F ((221-249))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEAYRDDVEAVEIMQRIHVLRSQGGFNLE-------


General information:
TITO was launched using:
RESULT:

Template: 5A0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 14 290 20.68 9.98
target 2D structure prediction score : 0.86
Monomeric hydrophicity matching model chain F : 0.52

3D Compatibility (PKB) : 20.68
2D Compatibility (Sec. Struct. Predict.) : 0.86
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.616

(partial model without unconserved sides chains):
PDB file : Tito_5A0Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5A0Y-query.scw
PDB file : Tito_Scwrl_5A0Y.pdb: