Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVRHSFPKNIFRAYDIRGKLS-YLTTDVVRSIAYGLAQQYKQAEQTQLIIGYDARLTSPAYAHLIEEILVEQGLNVTNIGCCSTPMMYYIAR--------EFG-GNGIMVTASHNPKSDNGIKWILRGEPPSPEMIQQVGEFAQTYVPTHTISLLELSTPQFNSKFCKKYQQAIFNDIQLKRPLKVVLDGLHGSAGHCSKLVLEKMGCEVIALRTTPNGEFPDHAPDPSHAAHLKELRKTIIEQGADIGIALDGDGDRVVLLDEKANILTADRLLSLFAQMCLEQQPDKEIVFDVKCSLMVQRTVERLGGKPKMIRTGSSFLRAYLSQSNGNAIFGGEYAGHYVFNDGRGFGYDDGLYAALRVMEYFTKSSATTISDLFSNYPERCCTEDTYIGTHQSDPK-HVLQDIEILSHRLG-ARISKIDGVRLDFDDGFGIIRASNTGEYFTVRFDADNPLRLKEIQQKFIDMLQERYPQIAQELSEA
3UW2 Chain:A ((22-482))-----MISQSIFKAYDIRGVIGKTLDADVARSIGRAFGSEVRAQGGDAVVVARDGRLSGPELVGALADGLRAAGVDVVDVGMVPTPVGYFAASVPLALSGGERRVDSCIVVTGSHNPPDYNGFKMVLRGAAIYGDQIQGLYKRIVD-ARFE----TGSGSYE-QYDVADQYVERIVGDIKLTRPLKLVVDAGNGVAGPLATRLFKALGCELVELFTDIDGNFPNHHPDPAHPENLQDVIAKLKATDAEIGFAFDGDGDRLGVVTKDGQIIYPDRQLMLFAEEVLSRNPGAQIIYDVKCTRNLARWVREKGGEPLMWKTGHSLVKAKLRE-T-GAPLAGEMSGHVFFKD-RWYGFDDGLYTGARLLEILARV-A-DPSALLNGLPNAVSTPELQL-------NVKLIDKLRADAKFDGADEVVTIDGLRVEYPDGFGLARSSNTTPVVVLRFEATSDAALARIQDDFRRALKAAKPGAN------


General information:
TITO was launched using:
RESULT:

Template: 3UW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2746 41533 15.12 93.75
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 15.12
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_3UW2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UW2-query.scw
PDB file : Tito_Scwrl_3UW2.pdb: